Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CDR1P51861 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CDR1P51861 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CDR1P51861 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDR1P51861 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDR1P51861 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CDR1P51861 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDR1P51861 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.33■■□□□ 1.17
CDR1P51861 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.33■■□□□ 1.17
CDR1P51861 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CDR1P51861 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.33■■□□□ 1.17
CDR1P51861 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.33■■□□□ 1.17
CDR1P51861 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
CDR1P51861 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CDR1P51861 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
CDR1P51861 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CDR1P51861 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDR1P51861 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDR1P51861 GPX1P1-201ENST00000388829 606 ntBASIC22.32■■□□□ 1.16
CDR1P51861 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.32■■□□□ 1.16
CDR1P51861 AC008175.2-201ENST00000612840 297 ntBASIC22.32■■□□□ 1.16
CDR1P51861 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.32■■□□□ 1.16
CDR1P51861 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.32■■□□□ 1.16
CDR1P51861 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDR1P51861 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.32■■□□□ 1.16
CDR1P51861 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.32■■□□□ 1.16
CDR1P51861 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDR1P51861 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CDR1P51861 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.31■■□□□ 1.16
CDR1P51861 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDR1P51861 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDR1P51861 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.31■■□□□ 1.16
CDR1P51861 TERF1P5-201ENST00000477545 1207 ntBASIC22.31■■□□□ 1.16
CDR1P51861 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 KRT18P20-201ENST00000548986 1279 ntBASIC22.31■■□□□ 1.16
CDR1P51861 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.31■■□□□ 1.16
CDR1P51861 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.31■■□□□ 1.16
CDR1P51861 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 AC231657.2-201ENST00000624556 255 ntBASIC22.31■■□□□ 1.16
CDR1P51861 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.31■■□□□ 1.16
CDR1P51861 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.31■■□□□ 1.16
CDR1P51861 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CDR1P51861 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDR1P51861 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CDR1P51861 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDR1P51861 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.3■■□□□ 1.16
CDR1P51861 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.3■■□□□ 1.16
CDR1P51861 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.3■■□□□ 1.16
CDR1P51861 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.3■■□□□ 1.16
CDR1P51861 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CDR1P51861 AL138781.1-201ENST00000566567 1274 ntBASIC22.3■■□□□ 1.16
CDR1P51861 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.3■■□□□ 1.16
CDR1P51861 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.3■■□□□ 1.16
CDR1P51861 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDR1P51861 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CDR1P51861 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CDR1P51861 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CDR1P51861 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.29■■□□□ 1.16
CDR1P51861 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms