Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.9■□□□□ 0.62
HTR3AP46098 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR3AP46098 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HTR3AP46098 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.89■□□□□ 0.62
HTR3AP46098 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HTR3AP46098 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
HTR3AP46098 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HTR3AP46098 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HTR3AP46098 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
HTR3AP46098 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HTR3AP46098 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.89■□□□□ 0.61
HTR3AP46098 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.89■□□□□ 0.61
HTR3AP46098 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.89■□□□□ 0.61
HTR3AP46098 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.89■□□□□ 0.61
HTR3AP46098 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HTR3AP46098 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.88■□□□□ 0.61
HTR3AP46098 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
HTR3AP46098 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.88■□□□□ 0.61
HTR3AP46098 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 MIR5787-201ENST00000611784 55 ntBASIC18.88■□□□□ 0.61
HTR3AP46098 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
HTR3AP46098 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR3AP46098 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR3AP46098 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.88■□□□□ 0.61
HTR3AP46098 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HTR3AP46098 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HTR3AP46098 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HTR3AP46098 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR3AP46098 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR3AP46098 SLC7A5P2-201ENST00000553010 536 ntBASIC18.87■□□□□ 0.61
HTR3AP46098 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR3AP46098 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR3AP46098 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR3AP46098 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR3AP46098 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HTR3AP46098 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.86■□□□□ 0.61
HTR3AP46098 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR3AP46098 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR3AP46098 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
HTR3AP46098 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR3AP46098 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HTR3AP46098 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HTR3AP46098 KRT18P11-201ENST00000435214 1283 ntBASIC18.85■□□□□ 0.61
HTR3AP46098 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.85■□□□□ 0.61
HTR3AP46098 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HTR3AP46098 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.85■□□□□ 0.61
HTR3AP46098 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTR3AP46098 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTR3AP46098 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR3AP46098 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms