Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX5P45973 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CBX5P45973 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CBX5P45973 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CBX5P45973 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CBX5P45973 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CBX5P45973 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CBX5P45973 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CBX5P45973 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CBX5P45973 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CBX5P45973 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.58■□□□□ 0.4
CBX5P45973 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CBX5P45973 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.58■□□□□ 0.4
CBX5P45973 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CBX5P45973 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.58■□□□□ 0.4
CBX5P45973 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CBX5P45973 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CBX5P45973 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.57■□□□□ 0.4
CBX5P45973 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CBX5P45973 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CBX5P45973 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.57■□□□□ 0.4
CBX5P45973 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CBX5P45973 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.56■□□□□ 0.4
CBX5P45973 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CBX5P45973 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.56■□□□□ 0.4
CBX5P45973 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBX5P45973 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CBX5P45973 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CBX5P45973 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.56■□□□□ 0.4
CBX5P45973 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms