Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A2P43004 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A2P43004 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A2P43004 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SLC1A2P43004 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 AL512408.1-201ENST00000569378 2000 ntBASIC20.45■□□□□ 0.86
SLC1A2P43004 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SLC1A2P43004 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC1A2P43004 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.45■□□□□ 0.86
SLC1A2P43004 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A2P43004 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A2P43004 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 AL391422.3-201ENST00000603791 2761 ntBASIC20.45■□□□□ 0.86
SLC1A2P43004 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A2P43004 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A2P43004 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A2P43004 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A2P43004 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SLC1A2P43004 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A2P43004 AC034268.1-201ENST00000441047 882 ntBASIC20.44■□□□□ 0.86
SLC1A2P43004 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A2P43004 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A2P43004 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC1A2P43004 NTF6G-201ENST00000591094 616 ntBASIC20.44■□□□□ 0.86
SLC1A2P43004 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 AC087623.3-201ENST00000607047 1098 ntBASIC20.44■□□□□ 0.86
SLC1A2P43004 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC1A2P43004 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A2P43004 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A2P43004 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A2P43004 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 MIR6821-201ENST00000617625 74 ntBASIC20.43■□□□□ 0.86
SLC1A2P43004 MYCNOS-205ENST00000641950 531 ntBASIC20.43■□□□□ 0.86
SLC1A2P43004 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A2P43004 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A2P43004 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
SLC1A2P43004 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC1A2P43004 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC1A2P43004 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SLC1A2P43004 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A2P43004 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.42■□□□□ 0.86
SLC1A2P43004 MIR2861-201ENST00000636310 90 ntBASIC20.42■□□□□ 0.86
SLC1A2P43004 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC1A2P43004 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A2P43004 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC1A2P43004 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A2P43004 AL162377.1-201ENST00000618844 1793 ntBASIC20.41■□□□□ 0.86
SLC1A2P43004 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A2P43004 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A2P43004 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A2P43004 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A2P43004 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC1A2P43004 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A2P43004 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A2P43004 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A2P43004 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms