Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YGR204C-AYGR204C-A 114 nt0.98□□□□□ -2.25
RPB11P38902 ALB1YJL122W 528 nt0.98□□□□□ -2.25
RPB11P38902 RIF2YLR453C 1188 nt0.98□□□□□ -2.25
RPB11P38902 ERG29YMR134W 714 nt0.98□□□□□ -2.25
RPB11P38902 CMC2YBL059C-A 330 nt0.98□□□□□ -2.25
RPB11P38902 CUP9YPL177C 921 nt0.98□□□□□ -2.25
RPB11P38902 YCL001W-AYCL001W-A 462 nt0.98□□□□□ -2.25
RPB11P38902 HIR3YJR140C 4947 nt0.98□□□□□ -2.25
RPB11P38902 MDM20YOL076W 2391 nt0.98□□□□□ -2.25
RPB11P38902 AI4Q0065 1671 nt0.97□□□□□ -2.25
RPB11P38902 UBP11YKR098C 2154 nt0.97□□□□□ -2.25
RPB11P38902 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
RPB11P38902 SEY1YOR165W 2331 nt0.97□□□□□ -2.25
RPB11P38902 MSL1YIR009W 336 nt0.97□□□□□ -2.25
RPB11P38902 YNL067W-AYNL067W-A 147 nt0.97□□□□□ -2.25
RPB11P38902 YBL108WYBL108W 306 nt0.97□□□□□ -2.25
RPB11P38902 CDC31YOR257W 486 nt0.97□□□□□ -2.25
RPB11P38902 NAN1YPL126W 2691 nt0.97□□□□□ -2.25
RPB11P38902 APL1YJR005W 2103 nt0.97□□□□□ -2.25
RPB11P38902 NOP53YPL146C 1368 nt0.96□□□□□ -2.26
RPB11P38902 YNL034WYNL034W 1839 nt0.96□□□□□ -2.26
RPB11P38902 YSW1YBR148W 1830 nt0.96□□□□□ -2.26
RPB11P38902 YDR286CYDR286C 345 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)E1tH(GUG)E1 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)E2tH(GUG)E2 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)G1tH(GUG)G1 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)G2tH(GUG)G2 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)HtH(GUG)H 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)KtH(GUG)K 72 nt0.96□□□□□ -2.26
RPB11P38902 tH(GUG)MtH(GUG)M 72 nt0.96□□□□□ -2.26
RPB11P38902 GTR2YGR163W 1026 nt0.96□□□□□ -2.26
RPB11P38902 YHR022CYHR022C 771 nt0.96□□□□□ -2.26
RPB11P38902 RPL34BYIL052C 366 nt0.96□□□□□ -2.26
RPB11P38902 RRT15YLR162W-A 189 nt0.96□□□□□ -2.26
RPB11P38902 GPN3YLR243W 819 nt0.96□□□□□ -2.26
RPB11P38902 NOP15YNL110C 663 nt0.96□□□□□ -2.26
RPB11P38902 GRE2YOL151W 1029 nt0.96□□□□□ -2.26
RPB11P38902 GAL7YBR018C 1101 nt0.96□□□□□ -2.26
RPB11P38902 MEI5YPL121C 669 nt0.96□□□□□ -2.26
RPB11P38902 CSH1YBR161W 1131 nt0.96□□□□□ -2.26
RPB11P38902 YSY6YBR162W-A 198 nt0.96□□□□□ -2.26
RPB11P38902 ADF1YCL058W-A 342 nt0.96□□□□□ -2.26
RPB11P38902 ADR1YDR216W 3972 nt0.96□□□□□ -2.26
RPB11P38902 EST2YLR318W 2655 nt0.96□□□□□ -2.26
RPB11P38902 TRZ1YKR079C 2517 nt0.95□□□□□ -2.26
RPB11P38902 PDP3YLR455W 915 nt0.95□□□□□ -2.26
RPB11P38902 MFA2YNL145W 117 nt0.95□□□□□ -2.26
RPB11P38902 YBL096CYBL096C 309 nt0.95□□□□□ -2.26
RPB11P38902 PEX27YOR193W 1131 nt0.95□□□□□ -2.26
RPB11P38902 MPC54YOR177C 1395 nt0.95□□□□□ -2.26
RPB11P38902 YCR015CYCR015C 954 nt0.94□□□□□ -2.26
RPB11P38902 BNA7YDR428C 786 nt0.94□□□□□ -2.26
RPB11P38902 YGL165CYGL165C 579 nt0.94□□□□□ -2.26
RPB11P38902 FSH1YHR049W 732 nt0.94□□□□□ -2.26
RPB11P38902 SRP21YKL122C 504 nt0.94□□□□□ -2.26
RPB11P38902 SPT7YBR081C 3999 nt0.94□□□□□ -2.26
RPB11P38902 YDR042CYDR042C 603 nt0.93□□□□□ -2.26
RPB11P38902 YLR255CYLR255C 354 nt0.93□□□□□ -2.26
RPB11P38902 YOR152CYOR152C 771 nt0.93□□□□□ -2.26
RPB11P38902 NCA2YPR155C 1851 nt0.92□□□□□ -2.26
RPB11P38902 AHC2YCR082W 387 nt0.92□□□□□ -2.26
RPB11P38902 MTC7YEL033W 420 nt0.92□□□□□ -2.26
RPB11P38902 MVB12YGR206W 306 nt0.92□□□□□ -2.26
RPB11P38902 YNL089CYNL089C 477 nt0.92□□□□□ -2.26
RPB11P38902 SPC72YAL047C 1869 nt0.92□□□□□ -2.26
RPB11P38902 MSH5YDL154W 2706 nt0.92□□□□□ -2.26
RPB11P38902 CDC5YMR001C 2118 nt0.91□□□□□ -2.26
RPB11P38902 EGD1YPL037C 474 nt0.91□□□□□ -2.26
RPB11P38902 RPB5YBR154C 648 nt0.91□□□□□ -2.26
RPB11P38902 YNL284C-BYNL284C-B 5268 nt0.91□□□□□ -2.26
RPB11P38902 YDR461C-AYDR461C-A 243 nt0.9□□□□□ -2.27
RPB11P38902 YGL006W-AYGL006W-A 111 nt0.9□□□□□ -2.27
RPB11P38902 IRC19YLL033W 693 nt0.9□□□□□ -2.27
RPB11P38902 CYB5YNL111C 363 nt0.9□□□□□ -2.27
RPB11P38902 LAA1YJL207C 6045 nt0.9□□□□□ -2.27
RPB11P38902 ALK1YGL021W 2283 nt0.9□□□□□ -2.27
RPB11P38902 YPD1YDL235C 504 nt0.89□□□□□ -2.27
RPB11P38902 YPT52YKR014C 705 nt0.89□□□□□ -2.27
RPB11P38902 EAF7YNL136W 1278 nt0.89□□□□□ -2.27
RPB11P38902 RPB11YOL005C 363 nt0.89□□□□□ -2.27
RPB11P38902 MSN5YDR335W 3675 nt0.88□□□□□ -2.27
RPB11P38902 NUP192YJL039C 5052 nt0.88□□□□□ -2.27
RPB11P38902 GPI8YDR331W 1236 nt0.88□□□□□ -2.27
RPB11P38902 NOP10YHR072W-A 177 nt0.88□□□□□ -2.27
RPB11P38902 FIP1YJR093C 984 nt0.88□□□□□ -2.27
RPB11P38902 CTK3YML112W 891 nt0.88□□□□□ -2.27
RPB11P38902 SFM1YOR021C 642 nt0.88□□□□□ -2.27
RPB11P38902 VPS28YPL065W 729 nt0.88□□□□□ -2.27
RPB11P38902 VMR1YHL035C 4779 nt0.88□□□□□ -2.27
RPB11P38902 MNL2YLR057W 2550 nt0.88□□□□□ -2.27
RPB11P38902 RGI1YER067W 486 nt0.87□□□□□ -2.27
RPB11P38902 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
RPB11P38902 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
RPB11P38902 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
RPB11P38902 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
RPB11P38902 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
RPB11P38902 RRT16YNL105W 429 nt0.87□□□□□ -2.27
RPB11P38902 YOL159C-AYOL159C-A 273 nt0.87□□□□□ -2.27
RPB11P38902 YPR146CYPR146C 330 nt0.87□□□□□ -2.27
RPB11P38902 YLR149CYLR149C 2193 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms