Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RFC1P35251 FP700111.2-201ENST00000619190 1892 ntBASIC21.61■■□□□ 1.05
RFC1P35251 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC1P35251 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC1P35251 AC006015.1-201ENST00000429970 570 ntBASIC21.61■■□□□ 1.05
RFC1P35251 KRT18P11-201ENST00000435214 1283 ntBASIC21.61■■□□□ 1.05
RFC1P35251 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RFC1P35251 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC1P35251 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
RFC1P35251 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFC1P35251 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFC1P35251 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.61■■□□□ 1.05
RFC1P35251 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.61■■□□□ 1.05
RFC1P35251 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFC1P35251 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
RFC1P35251 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFC1P35251 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.61■■□□□ 1.05
RFC1P35251 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RFC1P35251 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.6■■□□□ 1.05
RFC1P35251 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 TERF1P5-201ENST00000477545 1207 ntBASIC21.6■■□□□ 1.05
RFC1P35251 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
RFC1P35251 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.6■■□□□ 1.05
RFC1P35251 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFC1P35251 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RFC1P35251 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RFC1P35251 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC1P35251 LINC01006-201ENST00000333319 2292 ntBASIC21.59■■□□□ 1.05
RFC1P35251 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC1P35251 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RFC1P35251 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC1P35251 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC1P35251 AC016769.1-201ENST00000409132 1010 ntBASIC21.59■■□□□ 1.05
RFC1P35251 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFC1P35251 MFSD11-216ENST00000590393 1141 ntBASIC21.59■■□□□ 1.05
RFC1P35251 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RFC1P35251 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.59■■□□□ 1.05
RFC1P35251 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFC1P35251 AC073314.1-201ENST00000568729 2216 ntBASIC21.59■■□□□ 1.05
RFC1P35251 AC027702.1-201ENST00000563810 1770 ntBASIC21.59■■□□□ 1.05
RFC1P35251 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.58■■□□□ 1.05
RFC1P35251 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RFC1P35251 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 AC022517.1-201ENST00000592429 346 ntBASIC21.58■■□□□ 1.05
RFC1P35251 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFC1P35251 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RFC1P35251 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RFC1P35251 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFC1P35251 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RFC1P35251 AC092667.1-201ENST00000434301 2586 ntBASIC21.57■■□□□ 1.04
RFC1P35251 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.57■■□□□ 1.04
RFC1P35251 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RFC1P35251 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.57■■□□□ 1.04
RFC1P35251 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RFC1P35251 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFC1P35251 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.57■■□□□ 1.04
RFC1P35251 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RFC1P35251 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 AL121603.2-201ENST00000557373 2117 ntBASIC21.56■■□□□ 1.04
RFC1P35251 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.56■■□□□ 1.04
RFC1P35251 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.56■■□□□ 1.04
RFC1P35251 AC011767.1-201ENST00000617410 1153 ntBASIC21.56■■□□□ 1.04
RFC1P35251 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.56■■□□□ 1.04
RFC1P35251 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms