Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.91■□□□□ 0.62
ABCD3P28288 GUSBP6-202ENST00000438529 1198 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 TSPY6P-201ENST00000448518 926 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ABCD3P28288 AL109923.1-201ENST00000618799 583 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 AC006128.1-201ENST00000624704 1661 ntBASIC18.91■□□□□ 0.62
ABCD3P28288 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCD3P28288 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCD3P28288 CYP21A1P-202ENST00000354927 1481 ntBASIC18.9■□□□□ 0.62
ABCD3P28288 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCD3P28288 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCD3P28288 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCD3P28288 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 SLC29A4P1-201ENST00000398760 971 ntBASIC18.9■□□□□ 0.62
ABCD3P28288 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ABCD3P28288 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.9■□□□□ 0.62
ABCD3P28288 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.9■□□□□ 0.62
ABCD3P28288 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCD3P28288 AC104771.1-201ENST00000603335 964 ntBASIC18.9■□□□□ 0.62
ABCD3P28288 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCD3P28288 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCD3P28288 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCD3P28288 AC027702.1-201ENST00000563810 1770 ntBASIC18.9■□□□□ 0.62
ABCD3P28288 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCD3P28288 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ABCD3P28288 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCD3P28288 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ABCD3P28288 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCD3P28288 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCD3P28288 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCD3P28288 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCD3P28288 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCD3P28288 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCD3P28288 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ABCD3P28288 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCD3P28288 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCD3P28288 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCD3P28288 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCD3P28288 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCD3P28288 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCD3P28288 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCD3P28288 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCD3P28288 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCD3P28288 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCD3P28288 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCD3P28288 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.88■□□□□ 0.61
ABCD3P28288 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCD3P28288 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ABCD3P28288 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCD3P28288 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCD3P28288 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ABCD3P28288 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.88■□□□□ 0.61
ABCD3P28288 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCD3P28288 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCD3P28288 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ABCD3P28288 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCD3P28288 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ABCD3P28288 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms