Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SDHBP21912 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SDHBP21912 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SDHBP21912 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHBP21912 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.15■□□□□ 0.82
SDHBP21912 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.15■□□□□ 0.82
SDHBP21912 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.15■□□□□ 0.82
SDHBP21912 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHBP21912 KRT126P-201ENST00000549467 1181 ntBASIC20.15■□□□□ 0.82
SDHBP21912 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.15■□□□□ 0.82
SDHBP21912 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHBP21912 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHBP21912 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHBP21912 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHBP21912 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHBP21912 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.15■□□□□ 0.82
SDHBP21912 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.14■□□□□ 0.82
SDHBP21912 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SDHBP21912 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.14■□□□□ 0.82
SDHBP21912 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SDHBP21912 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHBP21912 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SDHBP21912 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SDHBP21912 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHBP21912 KRT18P57-201ENST00000443599 1254 ntBASIC20.14■□□□□ 0.81
SDHBP21912 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHBP21912 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SDHBP21912 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.14■□□□□ 0.81
SDHBP21912 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHBP21912 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHBP21912 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SDHBP21912 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.13■□□□□ 0.81
SDHBP21912 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.13■□□□□ 0.81
SDHBP21912 UNC93B2-201ENST00000285383 730 ntBASIC20.13■□□□□ 0.81
SDHBP21912 TERF1P1-201ENST00000311003 1181 ntBASIC20.13■□□□□ 0.81
SDHBP21912 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SDHBP21912 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.13■□□□□ 0.81
SDHBP21912 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.13■□□□□ 0.81
SDHBP21912 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.13■□□□□ 0.81
SDHBP21912 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SDHBP21912 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHBP21912 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SDHBP21912 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHBP21912 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SDHBP21912 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SDHBP21912 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 UPK3BP1-201ENST00000428678 509 ntBASIC20.12■□□□□ 0.81
SDHBP21912 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.12■□□□□ 0.81
SDHBP21912 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.12■□□□□ 0.81
SDHBP21912 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.12■□□□□ 0.81
SDHBP21912 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHBP21912 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHBP21912 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SDHBP21912 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SDHBP21912 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHBP21912 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHBP21912 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.11■□□□□ 0.81
SDHBP21912 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHBP21912 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 NAPSB-206ENST00000562112 1266 ntBASIC20.11■□□□□ 0.81
SDHBP21912 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHBP21912 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 AC061975.6-201ENST00000579045 1553 ntBASIC20.11■□□□□ 0.81
SDHBP21912 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHBP21912 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHBP21912 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms