Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 CNN2P6-201ENST00000439038 900 ntBASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 AC092437.1-201ENST00000624794 1048 ntBASIC20.7■□□□□ 0.9
HLA-DPA1P20036 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DPA1P20036 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 AC231657.2-201ENST00000624556 255 ntBASIC20.69■□□□□ 0.9
HLA-DPA1P20036 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-DPA1P20036 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 IKBKGP1-201ENST00000612193 1073 ntBASIC20.68■□□□□ 0.9
HLA-DPA1P20036 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-DPA1P20036 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 FP700111.2-201ENST00000619190 1892 ntBASIC20.67■□□□□ 0.9
HLA-DPA1P20036 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
HLA-DPA1P20036 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-DPA1P20036 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HLA-DPA1P20036 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms