Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.67■□□□□ 0.58
FREM3P0C091 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.67■□□□□ 0.58
FREM3P0C091 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM3P0C091 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM3P0C091 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM3P0C091 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.66■□□□□ 0.58
FREM3P0C091 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.66■□□□□ 0.58
FREM3P0C091 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.66■□□□□ 0.58
FREM3P0C091 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FREM3P0C091 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.66■□□□□ 0.58
FREM3P0C091 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FREM3P0C091 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM3P0C091 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM3P0C091 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FREM3P0C091 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.65■□□□□ 0.58
FREM3P0C091 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
FREM3P0C091 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.65■□□□□ 0.58
FREM3P0C091 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.65■□□□□ 0.58
FREM3P0C091 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.65■□□□□ 0.58
FREM3P0C091 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.65■□□□□ 0.58
FREM3P0C091 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.65■□□□□ 0.58
FREM3P0C091 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM3P0C091 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
FREM3P0C091 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.64■□□□□ 0.58
FREM3P0C091 AL157384.1-201ENST00000445995 2473 ntBASIC18.64■□□□□ 0.58
FREM3P0C091 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
FREM3P0C091 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FREM3P0C091 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 MCRIP2P1-201ENST00000394346 511 ntBASIC18.64■□□□□ 0.57
FREM3P0C091 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.64■□□□□ 0.57
FREM3P0C091 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.64■□□□□ 0.57
FREM3P0C091 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
FREM3P0C091 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FREM3P0C091 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.64■□□□□ 0.57
FREM3P0C091 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM3P0C091 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.64■□□□□ 0.57
FREM3P0C091 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
FREM3P0C091 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.64■□□□□ 0.57
FREM3P0C091 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM3P0C091 UNC93B5-201ENST00000530315 699 ntBASIC18.64■□□□□ 0.57
FREM3P0C091 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.64■□□□□ 0.57
FREM3P0C091 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.64■□□□□ 0.57
FREM3P0C091 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.64■□□□□ 0.57
FREM3P0C091 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FREM3P0C091 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.63■□□□□ 0.57
FREM3P0C091 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM3P0C091 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
FREM3P0C091 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.63■□□□□ 0.57
FREM3P0C091 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM3P0C091 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
FREM3P0C091 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.63■□□□□ 0.57
FREM3P0C091 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
FREM3P0C091 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
FREM3P0C091 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM3P0C091 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FREM3P0C091 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM3P0C091 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
FREM3P0C091 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.62■□□□□ 0.57
FREM3P0C091 MIR4758-201ENST00000577688 71 ntBASIC18.62■□□□□ 0.57
FREM3P0C091 AC100791.3-201ENST00000617619 330 ntBASIC18.62■□□□□ 0.57
FREM3P0C091 AC133041.1-202ENST00000642053 222 ntBASIC18.62■□□□□ 0.57
FREM3P0C091 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FREM3P0C091 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM3P0C091 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.62■□□□□ 0.57
FREM3P0C091 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms