Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.75■■□□□ 1.55
CHGBP05060 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CHGBP05060 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHGBP05060 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHGBP05060 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHGBP05060 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.75■■□□□ 1.55
CHGBP05060 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHGBP05060 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.75■■□□□ 1.55
CHGBP05060 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.74■■□□□ 1.55
CHGBP05060 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.74■■□□□ 1.55
CHGBP05060 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.74■■□□□ 1.55
CHGBP05060 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 AC027702.1-201ENST00000563810 1770 ntBASIC24.74■■□□□ 1.55
CHGBP05060 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.74■■□□□ 1.55
CHGBP05060 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHGBP05060 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CHGBP05060 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.73■■□□□ 1.55
CHGBP05060 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.73■■□□□ 1.55
CHGBP05060 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.73■■□□□ 1.55
CHGBP05060 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHGBP05060 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.73■■□□□ 1.55
CHGBP05060 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CHGBP05060 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.72■■□□□ 1.55
CHGBP05060 SLC29A4P1-201ENST00000398760 971 ntBASIC24.72■■□□□ 1.55
CHGBP05060 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.72■■□□□ 1.55
CHGBP05060 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.72■■□□□ 1.55
CHGBP05060 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHGBP05060 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.72■■□□□ 1.55
CHGBP05060 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CHGBP05060 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CHGBP05060 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.71■■□□□ 1.55
CHGBP05060 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CHGBP05060 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.71■■□□□ 1.55
CHGBP05060 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
CHGBP05060 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.71■■□□□ 1.55
CHGBP05060 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.71■■□□□ 1.55
CHGBP05060 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHGBP05060 AC006128.1-201ENST00000624704 1661 ntBASIC24.71■■□□□ 1.55
CHGBP05060 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.7■■□□□ 1.55
CHGBP05060 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHGBP05060 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHGBP05060 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.7■■□□□ 1.54
CHGBP05060 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.7■■□□□ 1.54
CHGBP05060 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.7■■□□□ 1.54
CHGBP05060 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.7■■□□□ 1.54
CHGBP05060 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.7■■□□□ 1.54
CHGBP05060 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.7■■□□□ 1.54
CHGBP05060 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.7■■□□□ 1.54
CHGBP05060 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.7■■□□□ 1.54
CHGBP05060 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHGBP05060 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.7■■□□□ 1.54
CHGBP05060 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHGBP05060 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.69■■□□□ 1.54
CHGBP05060 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.69■■□□□ 1.54
CHGBP05060 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.69■■□□□ 1.54
CHGBP05060 MCRIP2P1-201ENST00000394346 511 ntBASIC24.69■■□□□ 1.54
CHGBP05060 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.69■■□□□ 1.54
CHGBP05060 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.69■■□□□ 1.54
CHGBP05060 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.69■■□□□ 1.54
CHGBP05060 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHGBP05060 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.69■■□□□ 1.54
CHGBP05060 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms