Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT1P04628 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
WNT1P04628 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT1P04628 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
WNT1P04628 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
WNT1P04628 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WNT1P04628 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.23■□□□□ 0.83
WNT1P04628 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
WNT1P04628 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.23■□□□□ 0.83
WNT1P04628 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WNT1P04628 Z99916.2-201ENST00000604037 246 ntBASIC20.23■□□□□ 0.83
WNT1P04628 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
WNT1P04628 AC233723.2-201ENST00000623798 2106 ntBASIC20.23■□□□□ 0.83
WNT1P04628 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
WNT1P04628 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.22■□□□□ 0.83
WNT1P04628 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.22■□□□□ 0.83
WNT1P04628 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.22■□□□□ 0.83
WNT1P04628 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.22■□□□□ 0.83
WNT1P04628 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
WNT1P04628 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.22■□□□□ 0.83
WNT1P04628 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.22■□□□□ 0.83
WNT1P04628 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.22■□□□□ 0.83
WNT1P04628 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
WNT1P04628 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
WNT1P04628 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
WNT1P04628 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.21■□□□□ 0.83
WNT1P04628 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.21■□□□□ 0.83
WNT1P04628 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
WNT1P04628 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
WNT1P04628 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.21■□□□□ 0.83
WNT1P04628 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
WNT1P04628 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
WNT1P04628 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
WNT1P04628 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.2■□□□□ 0.82
WNT1P04628 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.2■□□□□ 0.82
WNT1P04628 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.2■□□□□ 0.82
WNT1P04628 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.2■□□□□ 0.82
WNT1P04628 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
WNT1P04628 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.2■□□□□ 0.82
WNT1P04628 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.2■□□□□ 0.82
WNT1P04628 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
WNT1P04628 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.2■□□□□ 0.82
WNT1P04628 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT1P04628 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
WNT1P04628 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.19■□□□□ 0.82
WNT1P04628 MIR718-201ENST00000390190 70 ntBASIC20.19■□□□□ 0.82
WNT1P04628 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.19■□□□□ 0.82
WNT1P04628 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
WNT1P04628 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
WNT1P04628 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms