Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TCRAP04437 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRAP04437 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRAP04437 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TCRAP04437 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TCRAP04437 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TCRAP04437 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
TCRAP04437 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TCRAP04437 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.58■□□□□ 0.09
TCRAP04437 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TCRAP04437 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRAP04437 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.58■□□□□ 0.08
TCRAP04437 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.58■□□□□ 0.08
TCRAP04437 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.58■□□□□ 0.08
TCRAP04437 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRAP04437 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.58■□□□□ 0.08
TCRAP04437 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TCRAP04437 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TCRAP04437 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TCRAP04437 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TCRAP04437 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TCRAP04437 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRAP04437 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
TCRAP04437 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TCRAP04437 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TCRAP04437 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TCRAP04437 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TCRAP04437 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRAP04437 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRAP04437 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRAP04437 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRAP04437 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.56■□□□□ 0.08
TCRAP04437 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TCRAP04437 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TCRAP04437 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 GUSBP5-201ENST00000418136 578 ntBASIC15.56■□□□□ 0.08
TCRAP04437 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 AC005224.4-201ENST00000583262 1652 ntBASIC15.56■□□□□ 0.08
TCRAP04437 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRAP04437 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TCRAP04437 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRAP04437 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRAP04437 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TCRAP04437 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TCRAP04437 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRAP04437 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRAP04437 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 AP004607.4-201ENST00000530158 1459 ntBASIC15.55■□□□□ 0.08
TCRAP04437 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRAP04437 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms