Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MT-ND3P03897 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-ND3P03897 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-ND3P03897 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.84■□□□□ 0.93
MT-ND3P03897 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.84■□□□□ 0.93
MT-ND3P03897 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MT-ND3P03897 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-ND3P03897 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-ND3P03897 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-ND3P03897 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MT-ND3P03897 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.83■□□□□ 0.93
MT-ND3P03897 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.83■□□□□ 0.93
MT-ND3P03897 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
MT-ND3P03897 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.83■□□□□ 0.93
MT-ND3P03897 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MT-ND3P03897 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MT-ND3P03897 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
MT-ND3P03897 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.83■□□□□ 0.93
MT-ND3P03897 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
MT-ND3P03897 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.83■□□□□ 0.92
MT-ND3P03897 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND3P03897 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
MT-ND3P03897 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND3P03897 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND3P03897 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
MT-ND3P03897 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND3P03897 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.82■□□□□ 0.92
MT-ND3P03897 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-ND3P03897 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 NTF6G-201ENST00000591094 616 ntBASIC20.82■□□□□ 0.92
MT-ND3P03897 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MT-ND3P03897 AFG3L1P-217ENST00000557444 2447 ntBASIC20.82■□□□□ 0.92
MT-ND3P03897 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-ND3P03897 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 AC007952.6-201ENST00000573168 2673 ntBASIC20.81■□□□□ 0.92
MT-ND3P03897 AC003957.1-201ENST00000625108 2673 ntBASIC20.81■□□□□ 0.92
MT-ND3P03897 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MT-ND3P03897 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-ND3P03897 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
MT-ND3P03897 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-ND3P03897 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MT-ND3P03897 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.81■□□□□ 0.92
MT-ND3P03897 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-ND3P03897 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.8■□□□□ 0.92
MT-ND3P03897 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-ND3P03897 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 IKBKGP1-201ENST00000612193 1073 ntBASIC20.8■□□□□ 0.92
MT-ND3P03897 RARRES2P11-201ENST00000635158 484 ntBASIC20.8■□□□□ 0.92
MT-ND3P03897 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-ND3P03897 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms