Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CLPTM1O96005 AC099778.1-201ENST00000568593 1911 ntBASIC19.29■□□□□ 0.68
CLPTM1O96005 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLPTM1O96005 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CLPTM1O96005 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLPTM1O96005 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLPTM1O96005 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CLPTM1O96005 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 AC099791.2-201ENST00000605725 427 ntBASIC19.28■□□□□ 0.68
CLPTM1O96005 AL512408.1-201ENST00000569378 2000 ntBASIC19.28■□□□□ 0.68
CLPTM1O96005 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLPTM1O96005 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLPTM1O96005 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.27■□□□□ 0.68
CLPTM1O96005 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPTM1O96005 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CLPTM1O96005 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLPTM1O96005 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLPTM1O96005 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLPTM1O96005 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.27■□□□□ 0.68
CLPTM1O96005 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLPTM1O96005 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLPTM1O96005 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.27■□□□□ 0.68
CLPTM1O96005 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.27■□□□□ 0.68
CLPTM1O96005 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.27■□□□□ 0.68
CLPTM1O96005 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.27■□□□□ 0.68
CLPTM1O96005 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CLPTM1O96005 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLPTM1O96005 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLPTM1O96005 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CLPTM1O96005 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLPTM1O96005 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.27■□□□□ 0.67
CLPTM1O96005 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CLPTM1O96005 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.26■□□□□ 0.67
CLPTM1O96005 NEFHP1-201ENST00000412845 2629 ntBASIC19.26■□□□□ 0.67
CLPTM1O96005 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 AC004687.1-201ENST00000579003 1625 ntBASIC19.26■□□□□ 0.67
CLPTM1O96005 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLPTM1O96005 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 AC096631.2-201ENST00000436136 790 ntBASIC19.26■□□□□ 0.67
CLPTM1O96005 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
CLPTM1O96005 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.26■□□□□ 0.67
CLPTM1O96005 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.26■□□□□ 0.67
CLPTM1O96005 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLPTM1O96005 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
CLPTM1O96005 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.25■□□□□ 0.67
CLPTM1O96005 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLPTM1O96005 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.25■□□□□ 0.67
CLPTM1O96005 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.25■□□□□ 0.67
CLPTM1O96005 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.25■□□□□ 0.67
CLPTM1O96005 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLPTM1O96005 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.25■□□□□ 0.67
CLPTM1O96005 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLPTM1O96005 AC005082.1-201ENST00000413042 2259 ntBASIC19.25■□□□□ 0.67
CLPTM1O96005 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLPTM1O96005 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CLPTM1O96005 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.24■□□□□ 0.67
CLPTM1O96005 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.24■□□□□ 0.67
CLPTM1O96005 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLPTM1O96005 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.24■□□□□ 0.67
CLPTM1O96005 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CLPTM1O96005 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms