Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 AC027702.1-201ENST00000563810 1770 ntBASIC20.43■□□□□ 0.86
PRAMEF1O95521 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PRAMEF1O95521 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEF1O95521 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 AC008694.1-202ENST00000636953 945 ntBASIC20.42■□□□□ 0.86
PRAMEF1O95521 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PRAMEF1O95521 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEF1O95521 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 CROCCP5-201ENST00000436658 830 ntBASIC20.41■□□□□ 0.86
PRAMEF1O95521 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 FP700111.2-201ENST00000619190 1892 ntBASIC20.41■□□□□ 0.86
PRAMEF1O95521 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PRAMEF1O95521 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEF1O95521 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRAMEF1O95521 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF1O95521 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 AL050303.2-201ENST00000619798 666 ntBASIC20.4■□□□□ 0.86
PRAMEF1O95521 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF1O95521 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF1O95521 AC007225.1-201ENST00000566331 1836 ntBASIC20.39■□□□□ 0.86
PRAMEF1O95521 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF1O95521 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.39■□□□□ 0.86
PRAMEF1O95521 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 AC006970.2-201ENST00000450065 779 ntBASIC20.39■□□□□ 0.85
PRAMEF1O95521 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.39■□□□□ 0.85
PRAMEF1O95521 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF1O95521 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 OR10C1-204ENST00000622521 1039 ntBASIC20.39■□□□□ 0.85
PRAMEF1O95521 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF1O95521 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEF1O95521 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF1O95521 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEF1O95521 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms