Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.4■□□□□ 0.22
NDUFA3O95167 CNN2P6-201ENST00000439038 900 ntBASIC16.4■□□□□ 0.22
NDUFA3O95167 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NDUFA3O95167 AC231657.2-201ENST00000624556 255 ntBASIC16.4■□□□□ 0.22
NDUFA3O95167 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.4■□□□□ 0.22
NDUFA3O95167 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NDUFA3O95167 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA3O95167 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA3O95167 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.39■□□□□ 0.22
NDUFA3O95167 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NDUFA3O95167 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NDUFA3O95167 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.39■□□□□ 0.21
NDUFA3O95167 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.39■□□□□ 0.21
NDUFA3O95167 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.39■□□□□ 0.21
NDUFA3O95167 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.39■□□□□ 0.21
NDUFA3O95167 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.39■□□□□ 0.21
NDUFA3O95167 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.39■□□□□ 0.21
NDUFA3O95167 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NDUFA3O95167 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDUFA3O95167 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA3O95167 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA3O95167 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NDUFA3O95167 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA3O95167 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NDUFA3O95167 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.38■□□□□ 0.21
NDUFA3O95167 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.38■□□□□ 0.21
NDUFA3O95167 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.38■□□□□ 0.21
NDUFA3O95167 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.38■□□□□ 0.21
NDUFA3O95167 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NDUFA3O95167 IKBKGP1-201ENST00000612193 1073 ntBASIC16.38■□□□□ 0.21
NDUFA3O95167 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NDUFA3O95167 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NDUFA3O95167 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 AC007225.1-201ENST00000566331 1836 ntBASIC16.38■□□□□ 0.21
NDUFA3O95167 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NDUFA3O95167 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.38■□□□□ 0.21
NDUFA3O95167 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA3O95167 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NDUFA3O95167 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NDUFA3O95167 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 AL137784.2-201ENST00000607332 1000 ntBASIC16.37■□□□□ 0.21
NDUFA3O95167 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA3O95167 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NDUFA3O95167 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NDUFA3O95167 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.37■□□□□ 0.21
NDUFA3O95167 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NDUFA3O95167 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.37■□□□□ 0.21
NDUFA3O95167 AC068338.2-201ENST00000563278 1430 ntBASIC16.36■□□□□ 0.21
NDUFA3O95167 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
NDUFA3O95167 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA3O95167 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NDUFA3O95167 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
NDUFA3O95167 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA3O95167 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.36■□□□□ 0.21
NDUFA3O95167 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NDUFA3O95167 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.36■□□□□ 0.21
NDUFA3O95167 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms