Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.69■□□□□ 0.74
SNRNP200O75643 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.69■□□□□ 0.74
SNRNP200O75643 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.69■□□□□ 0.74
SNRNP200O75643 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.69■□□□□ 0.74
SNRNP200O75643 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNRNP200O75643 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.69■□□□□ 0.74
SNRNP200O75643 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
SNRNP200O75643 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.68■□□□□ 0.74
SNRNP200O75643 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNRNP200O75643 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.68■□□□□ 0.74
SNRNP200O75643 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP200O75643 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP200O75643 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP200O75643 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
SNRNP200O75643 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.68■□□□□ 0.74
SNRNP200O75643 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.68■□□□□ 0.74
SNRNP200O75643 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP200O75643 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SNRNP200O75643 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNRNP200O75643 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNRNP200O75643 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP200O75643 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP200O75643 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
SNRNP200O75643 AL121603.2-201ENST00000557373 2117 ntBASIC19.67■□□□□ 0.74
SNRNP200O75643 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNRNP200O75643 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP200O75643 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRNP200O75643 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 AC011484.1-201ENST00000377652 1995 ntBASIC19.67■□□□□ 0.74
SNRNP200O75643 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNRNP200O75643 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNRNP200O75643 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP200O75643 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP200O75643 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRNP200O75643 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SNRNP200O75643 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRNP200O75643 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRNP200O75643 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.66■□□□□ 0.74
SNRNP200O75643 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRNP200O75643 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP200O75643 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRNP200O75643 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SNRNP200O75643 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRNP200O75643 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP200O75643 KRT18P6-201ENST00000555540 1265 ntBASIC19.66■□□□□ 0.74
SNRNP200O75643 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.66■□□□□ 0.74
SNRNP200O75643 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.65■□□□□ 0.74
SNRNP200O75643 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SNRNP200O75643 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNRNP200O75643 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNRNP200O75643 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.65■□□□□ 0.74
SNRNP200O75643 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 RNA5SP413-201ENST00000516373 109 ntBASIC19.65■□□□□ 0.74
SNRNP200O75643 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.65■□□□□ 0.74
SNRNP200O75643 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SNRNP200O75643 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNRNP200O75643 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRNP200O75643 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.64■□□□□ 0.74
SNRNP200O75643 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNRNP200O75643 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNRNP200O75643 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.64■□□□□ 0.73
SNRNP200O75643 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP200O75643 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.64■□□□□ 0.73
SNRNP200O75643 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.64■□□□□ 0.73
SNRNP200O75643 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.64■□□□□ 0.73
SNRNP200O75643 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP200O75643 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP200O75643 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNRNP200O75643 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms