Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.25■□□□□ 0.67
CTNSO60931 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.25■□□□□ 0.67
CTNSO60931 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.25■□□□□ 0.67
CTNSO60931 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNSO60931 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CTNSO60931 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 CYP21A1P-202ENST00000354927 1481 ntBASIC19.24■□□□□ 0.67
CTNSO60931 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.24■□□□□ 0.67
CTNSO60931 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.24■□□□□ 0.67
CTNSO60931 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.24■□□□□ 0.67
CTNSO60931 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 MKRN4P-201ENST00000444706 1521 ntBASIC19.24■□□□□ 0.67
CTNSO60931 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CTNSO60931 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNSO60931 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.24■□□□□ 0.67
CTNSO60931 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
CTNSO60931 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTNSO60931 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTNSO60931 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.23■□□□□ 0.67
CTNSO60931 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.23■□□□□ 0.67
CTNSO60931 TSPY6P-201ENST00000448518 926 ntBASIC19.23■□□□□ 0.67
CTNSO60931 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNSO60931 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNSO60931 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
CTNSO60931 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTNSO60931 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CTNSO60931 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNSO60931 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNSO60931 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNSO60931 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTNSO60931 PGM5P4-201ENST00000421970 445 ntBASIC19.22■□□□□ 0.67
CTNSO60931 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTNSO60931 CYP2T3P-201ENST00000601990 817 ntBASIC19.22■□□□□ 0.67
CTNSO60931 AL109923.1-201ENST00000618799 583 ntBASIC19.22■□□□□ 0.67
CTNSO60931 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNSO60931 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.22■□□□□ 0.67
CTNSO60931 MIR2861-201ENST00000636310 90 ntBASIC19.22■□□□□ 0.67
CTNSO60931 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNSO60931 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
CTNSO60931 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.22■□□□□ 0.67
CTNSO60931 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTNSO60931 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.21■□□□□ 0.67
CTNSO60931 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CTNSO60931 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTNSO60931 ID1-201ENST00000376105 1233 ntBASIC19.21■□□□□ 0.67
CTNSO60931 KRT18P68-201ENST00000392293 1000 ntBASIC19.21■□□□□ 0.67
CTNSO60931 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CTNSO60931 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTNSO60931 SLC29A4P1-201ENST00000398760 971 ntBASIC19.21■□□□□ 0.67
CTNSO60931 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.21■□□□□ 0.67
CTNSO60931 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTNSO60931 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms