Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNT1O60563 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.33■■□□□ 1.33
CCNT1O60563 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNT1O60563 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CCNT1O60563 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.33■■□□□ 1.33
CCNT1O60563 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
CCNT1O60563 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.33■■□□□ 1.32
CCNT1O60563 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCNT1O60563 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.33■■□□□ 1.32
CCNT1O60563 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.32■■□□□ 1.32
CCNT1O60563 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.32■■□□□ 1.32
CCNT1O60563 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.32■■□□□ 1.32
CCNT1O60563 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.32■■□□□ 1.32
CCNT1O60563 OR10C1-204ENST00000622521 1039 ntBASIC23.32■■□□□ 1.32
CCNT1O60563 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 FP700111.2-201ENST00000619190 1892 ntBASIC23.32■■□□□ 1.32
CCNT1O60563 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.32■■□□□ 1.32
CCNT1O60563 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CCNT1O60563 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNT1O60563 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.32■■□□□ 1.32
CCNT1O60563 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNT1O60563 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CCNT1O60563 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNT1O60563 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNT1O60563 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CCNT1O60563 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.3■■□□□ 1.32
CCNT1O60563 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.3■■□□□ 1.32
CCNT1O60563 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 AC093787.1-201ENST00000450396 207 ntBASIC23.3■■□□□ 1.32
CCNT1O60563 AC133552.2-202ENST00000575694 574 ntBASIC23.3■■□□□ 1.32
CCNT1O60563 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNT1O60563 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CCNT1O60563 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.29■■□□□ 1.32
CCNT1O60563 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNT1O60563 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNT1O60563 AC007225.1-201ENST00000566331 1836 ntBASIC23.29■■□□□ 1.32
CCNT1O60563 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNT1O60563 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNT1O60563 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNT1O60563 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNT1O60563 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNT1O60563 AC105036.2-201ENST00000569468 176 ntBASIC23.28■■□□□ 1.32
CCNT1O60563 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.28■■□□□ 1.32
CCNT1O60563 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CCNT1O60563 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNT1O60563 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
CCNT1O60563 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CCNT1O60563 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
CCNT1O60563 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNT1O60563 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CCNT1O60563 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNT1O60563 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNT1O60563 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.27■■□□□ 1.32
CCNT1O60563 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 AF201337.1-201ENST00000520239 748 ntBASIC23.27■■□□□ 1.32
CCNT1O60563 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNT1O60563 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNT1O60563 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
CCNT1O60563 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNT1O60563 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.27■■□□□ 1.32
CCNT1O60563 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms