Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXS1O43638 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FOXS1O43638 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FOXS1O43638 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXS1O43638 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXS1O43638 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXS1O43638 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXS1O43638 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXS1O43638 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXS1O43638 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXS1O43638 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXS1O43638 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXS1O43638 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
FOXS1O43638 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXS1O43638 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXS1O43638 AC083880.1-201ENST00000608266 535 ntBASIC19.36■□□□□ 0.69
FOXS1O43638 AC105020.6-201ENST00000621523 1217 ntBASIC19.36■□□□□ 0.69
FOXS1O43638 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXS1O43638 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
FOXS1O43638 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
FOXS1O43638 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FOXS1O43638 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXS1O43638 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
FOXS1O43638 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXS1O43638 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
FOXS1O43638 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXS1O43638 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.35■□□□□ 0.69
FOXS1O43638 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FOXS1O43638 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXS1O43638 AC097658.1-201ENST00000475555 843 ntBASIC19.35■□□□□ 0.69
FOXS1O43638 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXS1O43638 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXS1O43638 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXS1O43638 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FOXS1O43638 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 KRT18P6-201ENST00000555540 1265 ntBASIC19.34■□□□□ 0.69
FOXS1O43638 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXS1O43638 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 MIR2861-201ENST00000636310 90 ntBASIC19.34■□□□□ 0.69
FOXS1O43638 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXS1O43638 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXS1O43638 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.34■□□□□ 0.69
FOXS1O43638 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXS1O43638 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.69
FOXS1O43638 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FOXS1O43638 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
FOXS1O43638 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FOXS1O43638 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXS1O43638 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXS1O43638 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXS1O43638 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXS1O43638 AL356652.1-201ENST00000615962 565 ntBASIC19.33■□□□□ 0.68
FOXS1O43638 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
FOXS1O43638 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXS1O43638 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
FOXS1O43638 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXS1O43638 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXS1O43638 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms