Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF13O43567 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF13O43567 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF13O43567 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF13O43567 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF13O43567 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RNF13O43567 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF13O43567 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF13O43567 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF13O43567 AP001160.3-201ENST00000601484 763 ntBASIC18.63■□□□□ 0.57
RNF13O43567 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF13O43567 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF13O43567 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF13O43567 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF13O43567 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF13O43567 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF13O43567 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF13O43567 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF13O43567 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF13O43567 KRT16P2-201ENST00000414673 1423 ntBASIC18.62■□□□□ 0.57
RNF13O43567 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF13O43567 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF13O43567 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF13O43567 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF13O43567 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF13O43567 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF13O43567 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RNF13O43567 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF13O43567 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF13O43567 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF13O43567 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF13O43567 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF13O43567 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF13O43567 AC004854.2-201ENST00000608450 1441 ntBASIC18.6■□□□□ 0.57
RNF13O43567 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF13O43567 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF13O43567 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RNF13O43567 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 AC245052.3-201ENST00000450182 901 ntBASIC18.6■□□□□ 0.57
RNF13O43567 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RNF13O43567 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF13O43567 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF13O43567 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
RNF13O43567 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF13O43567 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF13O43567 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF13O43567 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF13O43567 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
RNF13O43567 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms