Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
XRCC2O43543 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.8■□□□□ 0.44
XRCC2O43543 MYCNOS-205ENST00000641950 531 ntBASIC17.8■□□□□ 0.44
XRCC2O43543 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
XRCC2O43543 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
XRCC2O43543 LINC01521-201ENST00000504184 1943 ntBASIC17.79■□□□□ 0.44
XRCC2O43543 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.79■□□□□ 0.44
XRCC2O43543 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.79■□□□□ 0.44
XRCC2O43543 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.79■□□□□ 0.44
XRCC2O43543 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.79■□□□□ 0.44
XRCC2O43543 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.79■□□□□ 0.44
XRCC2O43543 AC087623.3-201ENST00000607047 1098 ntBASIC17.79■□□□□ 0.44
XRCC2O43543 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
XRCC2O43543 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.79■□□□□ 0.44
XRCC2O43543 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.79■□□□□ 0.44
XRCC2O43543 AL157384.1-201ENST00000445995 2473 ntBASIC17.79■□□□□ 0.44
XRCC2O43543 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
XRCC2O43543 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XRCC2O43543 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.78■□□□□ 0.44
XRCC2O43543 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 FP700111.2-201ENST00000619190 1892 ntBASIC17.78■□□□□ 0.44
XRCC2O43543 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
XRCC2O43543 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.78■□□□□ 0.44
XRCC2O43543 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 AC091799.1-201ENST00000422823 811 ntBASIC17.78■□□□□ 0.44
XRCC2O43543 KRT18P11-201ENST00000435214 1283 ntBASIC17.78■□□□□ 0.44
XRCC2O43543 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.78■□□□□ 0.44
XRCC2O43543 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
XRCC2O43543 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.78■□□□□ 0.44
XRCC2O43543 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.78■□□□□ 0.44
XRCC2O43543 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.78■□□□□ 0.44
XRCC2O43543 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
XRCC2O43543 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
XRCC2O43543 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XRCC2O43543 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
XRCC2O43543 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.77■□□□□ 0.44
XRCC2O43543 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.77■□□□□ 0.44
XRCC2O43543 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
XRCC2O43543 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
XRCC2O43543 AC027702.1-201ENST00000563810 1770 ntBASIC17.77■□□□□ 0.44
XRCC2O43543 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.77■□□□□ 0.44
XRCC2O43543 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
XRCC2O43543 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
XRCC2O43543 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.77■□□□□ 0.44
XRCC2O43543 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC2O43543 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
XRCC2O43543 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC2O43543 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.77■□□□□ 0.43
XRCC2O43543 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC2O43543 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC2O43543 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
XRCC2O43543 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC2O43543 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 GABARAPL3-202ENST00000624044 1851 ntBASIC17.76■□□□□ 0.43
XRCC2O43543 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC2O43543 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
XRCC2O43543 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
XRCC2O43543 AC007322.3-201ENST00000426526 701 ntBASIC17.76■□□□□ 0.43
XRCC2O43543 CDV3P1-201ENST00000471403 739 ntBASIC17.76■□□□□ 0.43
XRCC2O43543 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.76■□□□□ 0.43
XRCC2O43543 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
XRCC2O43543 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.76■□□□□ 0.43
XRCC2O43543 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.76■□□□□ 0.43
XRCC2O43543 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
XRCC2O43543 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms