Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.91■□□□□ 0.62
TO15178 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
TO15178 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.91■□□□□ 0.62
TO15178 MCRIP2P1-201ENST00000394346 511 ntBASIC18.91■□□□□ 0.62
TO15178 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
TO15178 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
TO15178 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TO15178 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.91■□□□□ 0.62
TO15178 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.9■□□□□ 0.62
TO15178 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.9■□□□□ 0.62
TO15178 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.9■□□□□ 0.62
TO15178 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TO15178 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.9■□□□□ 0.62
TO15178 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.9■□□□□ 0.62
TO15178 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 AC093787.1-201ENST00000450396 207 ntBASIC18.9■□□□□ 0.62
TO15178 MIR2861-201ENST00000636310 90 ntBASIC18.9■□□□□ 0.62
TO15178 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TO15178 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TO15178 AC087633.2-202ENST00000565166 1439 ntBASIC18.9■□□□□ 0.62
TO15178 AC010980.2-201ENST00000587099 1412 ntBASIC18.9■□□□□ 0.62
TO15178 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TO15178 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TO15178 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TO15178 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.89■□□□□ 0.62
TO15178 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TO15178 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.89■□□□□ 0.62
TO15178 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TO15178 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
TO15178 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.89■□□□□ 0.61
TO15178 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.89■□□□□ 0.61
TO15178 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.89■□□□□ 0.61
TO15178 AC083906.2-201ENST00000511578 360 ntBASIC18.89■□□□□ 0.61
TO15178 AC105036.2-201ENST00000569468 176 ntBASIC18.89■□□□□ 0.61
TO15178 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.89■□□□□ 0.61
TO15178 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.89■□□□□ 0.61
TO15178 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TO15178 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.89■□□□□ 0.61
TO15178 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TO15178 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TO15178 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TO15178 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
TO15178 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.88■□□□□ 0.61
TO15178 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 GPX1P1-201ENST00000388829 606 ntBASIC18.88■□□□□ 0.61
TO15178 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
TO15178 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.88■□□□□ 0.61
TO15178 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.88■□□□□ 0.61
TO15178 CYP2T3P-201ENST00000601990 817 ntBASIC18.88■□□□□ 0.61
TO15178 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.88■□□□□ 0.61
TO15178 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.88■□□□□ 0.61
TO15178 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TO15178 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.88■□□□□ 0.61
TO15178 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TO15178 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.87■□□□□ 0.61
TO15178 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TO15178 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TO15178 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TO15178 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.87■□□□□ 0.61
TO15178 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.87■□□□□ 0.61
TO15178 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.87■□□□□ 0.61
TO15178 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms