Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX4O14627 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX4O14627 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
CDX4O14627 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDX4O14627 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.97■□□□□ 0.79
CDX4O14627 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.97■□□□□ 0.79
CDX4O14627 MIR6786-201ENST00000616843 113 ntBASIC19.97■□□□□ 0.79
CDX4O14627 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.97■□□□□ 0.79
CDX4O14627 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
CDX4O14627 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDX4O14627 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.96■□□□□ 0.79
CDX4O14627 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.96■□□□□ 0.79
CDX4O14627 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.96■□□□□ 0.79
CDX4O14627 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.96■□□□□ 0.79
CDX4O14627 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 AC005363.2-201ENST00000618631 242 ntBASIC19.96■□□□□ 0.79
CDX4O14627 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDX4O14627 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.96■□□□□ 0.79
CDX4O14627 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDX4O14627 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 AC005521.1-201ENST00000393351 872 ntBASIC19.95■□□□□ 0.78
CDX4O14627 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.95■□□□□ 0.78
CDX4O14627 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.95■□□□□ 0.78
CDX4O14627 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.95■□□□□ 0.78
CDX4O14627 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDX4O14627 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.94■□□□□ 0.78
CDX4O14627 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CDX4O14627 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.94■□□□□ 0.78
CDX4O14627 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.94■□□□□ 0.78
CDX4O14627 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.94■□□□□ 0.78
CDX4O14627 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 HTR7P1-201ENST00000538670 1336 ntBASIC19.94■□□□□ 0.78
CDX4O14627 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.94■□□□□ 0.78
CDX4O14627 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDX4O14627 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.94■□□□□ 0.78
CDX4O14627 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX4O14627 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX4O14627 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX4O14627 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.93■□□□□ 0.78
CDX4O14627 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
CDX4O14627 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDX4O14627 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.93■□□□□ 0.78
CDX4O14627 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.93■□□□□ 0.78
CDX4O14627 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.93■□□□□ 0.78
CDX4O14627 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
CDX4O14627 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CDX4O14627 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDX4O14627 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CDX4O14627 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX4O14627 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX4O14627 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDX4O14627 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms