Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAFD1O14545 AC013268.1-206ENST00000638368 961 ntBASIC21.01■□□□□ 0.95
TRAFD1O14545 AC112229.1-201ENST00000639295 961 ntBASIC21.01■□□□□ 0.95
TRAFD1O14545 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAFD1O14545 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRAFD1O14545 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAFD1O14545 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TRAFD1O14545 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TRAFD1O14545 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
TRAFD1O14545 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRAFD1O14545 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21■□□□□ 0.95
TRAFD1O14545 AC026185.1-201ENST00000445748 174 ntBASIC21■□□□□ 0.95
TRAFD1O14545 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21■□□□□ 0.95
TRAFD1O14545 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21■□□□□ 0.95
TRAFD1O14545 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRAFD1O14545 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRAFD1O14545 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAFD1O14545 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAFD1O14545 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.99■□□□□ 0.95
TRAFD1O14545 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TRAFD1O14545 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAFD1O14545 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAFD1O14545 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAFD1O14545 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAFD1O14545 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAFD1O14545 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAFD1O14545 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAFD1O14545 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TRAFD1O14545 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRAFD1O14545 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.98■□□□□ 0.95
TRAFD1O14545 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TRAFD1O14545 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 AC007322.1-201ENST00000426983 750 ntBASIC20.98■□□□□ 0.95
TRAFD1O14545 CROCCP5-201ENST00000436658 830 ntBASIC20.98■□□□□ 0.95
TRAFD1O14545 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
TRAFD1O14545 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAFD1O14545 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAFD1O14545 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRAFD1O14545 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAFD1O14545 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAFD1O14545 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TRAFD1O14545 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRAFD1O14545 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.97■□□□□ 0.95
TRAFD1O14545 AC091799.1-201ENST00000422823 811 ntBASIC20.97■□□□□ 0.95
TRAFD1O14545 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAFD1O14545 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAFD1O14545 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAFD1O14545 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAFD1O14545 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRAFD1O14545 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAFD1O14545 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAFD1O14545 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRAFD1O14545 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRAFD1O14545 AC068338.2-201ENST00000563278 1430 ntBASIC20.96■□□□□ 0.95
TRAFD1O14545 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms