Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
PLEKHD1A6NEE1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PLEKHD1A6NEE1 C1orf229-201ENST00000623686 2258 ntBASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 AL390719.1-204ENST00000412397 1219 ntBASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
PLEKHD1A6NEE1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PLEKHD1A6NEE1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 AL356652.1-201ENST00000615962 565 ntBASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PLEKHD1A6NEE1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
PLEKHD1A6NEE1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PLEKHD1A6NEE1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PLEKHD1A6NEE1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 AL353708.3-201ENST00000610272 989 ntBASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PLEKHD1A6NEE1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
PLEKHD1A6NEE1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
PLEKHD1A6NEE1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
PLEKHD1A6NEE1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PLEKHD1A6NEE1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.81■■■□□ 2.68
PLEKHD1A6NEE1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PLEKHD1A6NEE1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms