Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 AL353708.3-201ENST00000610272 989 ntBASIC24.18■■□□□ 1.46
SSC5DA1L4H1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SSC5DA1L4H1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.17■■□□□ 1.46
SSC5DA1L4H1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 AP001412.1-201ENST00000608405 714 ntBASIC24.16■■□□□ 1.46
SSC5DA1L4H1 AL356652.1-201ENST00000615962 565 ntBASIC24.16■■□□□ 1.46
SSC5DA1L4H1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SSC5DA1L4H1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.15■■□□□ 1.46
SSC5DA1L4H1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.14■■□□□ 1.46
SSC5DA1L4H1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SSC5DA1L4H1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SSC5DA1L4H1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.14■■□□□ 1.45
SSC5DA1L4H1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.14■■□□□ 1.45
SSC5DA1L4H1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SSC5DA1L4H1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 RN7SL850P-201ENST00000579959 291 ntBASIC24.12■■□□□ 1.45
SSC5DA1L4H1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.12■■□□□ 1.45
SSC5DA1L4H1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms