Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 AC009237.3-201ENST00000393279 1427 ntBASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 SRD5A1P1-201ENST00000442297 786 ntBASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV3S1A0A5B6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 AC136469.2-201ENST00000623944 1028 ntBASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV3S1A0A5B6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 SERBP1P1-201ENST00000396021 1160 ntBASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV3S1A0A5B6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 AL356740.2-201ENST00000601559 647 ntBASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV3S1A0A5B6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms