Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC011484.1-201ENST00000377652 1995 ntBASIC16.66■□□□□ 0.26
CENPVL3A0A0U1RRI6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 AL024507.2-201ENST00000606070 2574 ntBASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 PGM5P4-201ENST00000421970 445 ntBASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 ITM2C-210ENST00000620962 501 ntBASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPVL3A0A0U1RRI6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
CENPVL3A0A0U1RRI6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 UNC93B5-201ENST00000530315 699 ntBASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 AC060766.5-201ENST00000590539 871 ntBASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 HLA-B-256ENST00000639848 1089 ntBASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPVL3A0A0U1RRI6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 KRT18P29-201ENST00000397031 1267 ntBASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPVL3A0A0U1RRI6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.62■□□□□ 0.25
CENPVL3A0A0U1RRI6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.62■□□□□ 0.25
CENPVL3A0A0U1RRI6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CENPVL3A0A0U1RRI6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CENPVL3A0A0U1RRI6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CENPVL3A0A0U1RRI6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms