Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV34A0A0B4J273 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 AL512408.1-201ENST00000569378 2000 ntBASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV34A0A0B4J273 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 AP006587.3-201ENST00000525742 1516 ntBASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MIR6724-1-201ENST00000616420 92 ntBASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MIR6724-2-201ENST00000616483 92 ntBASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MIR6724-4-201ENST00000617390 92 ntBASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MIR6724-3-201ENST00000622482 92 ntBASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV34A0A0B4J273 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 FP700111.2-201ENST00000619190 1892 ntBASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV34A0A0B4J273 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms