Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 AC007322.3-201ENST00000426526 701 ntBASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 AL591742.1-201ENST00000604433 565 ntBASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 AC231657.2-201ENST00000624556 255 ntBASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 FAM21FP-204ENST00000608637 956 ntBASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 AC011767.1-201ENST00000617410 1153 ntBASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV2A0A0B4J234 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 AL137784.2-201ENST00000607332 1000 ntBASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV2A0A0B4J234 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 DUX4L16-201ENST00000555130 1264 ntBASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV2A0A0B4J234 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV2A0A0B4J234 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV2A0A0B4J234 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV2A0A0B4J234 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms