Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 KRT18P24-201ENST00000344739 1156 ntBASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 AC068587.7-201ENST00000641602 218 ntBASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV9-1A0A075B6T8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 DUX4L9-201ENST00000449051 1259 ntBASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV9-1A0A075B6T8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 TMEM179-206ENST00000616017 1645 ntBASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 AC093484.2-201ENST00000580996 2166 ntBASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms