Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP005265.1-201ENST00000584914 872 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AC048344.3-201ENST00000605512 251 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL844908.1-201ENST00000609953 652 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 AC087284.1-201ENST00000614119 1049 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 AP003108.5-201ENST00000623008 895 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 DANCR-205ENST00000623036 748 ntTSL 5 BASIC9.52□□□□□ -0.89
SLC1A1P43005 SERPINB11-208ENST00000623262 918 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 AC244452.4-201ENST00000637112 283 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC9.52□□□□□ -0.89
SLC1A1P43005 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC9.52□□□□□ -0.89
SLC1A1P43005 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SLC1A1P43005 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SLC1A1P43005 BTN2A3P-201ENST00000377662 1836 ntBASIC9.52□□□□□ -0.89
SLC1A1P43005 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 ANKRD45-201ENST00000333279 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 AL136087.1-201ENST00000305491 426 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 GAPDHP63-201ENST00000405405 1007 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 AC083822.1-201ENST00000438001 201 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 AL357079.1-202ENST00000445226 294 ntTSL 3 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LINC01627-201ENST00000452923 243 ntTSL 3 BASIC9.51□□□□□ -0.89
SLC1A1P43005 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 IGKV2-14-201ENST00000517571 347 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 IGLVI-38-201ENST00000519982 385 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 ACTBP6-201ENST00000520036 1090 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MED31-203ENST00000575197 593 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 MIR3650-201ENST00000581972 60 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 IGKV2D-29-202ENST00000612356 310 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 RFPL3-AS1_1.2-201ENST00000618747 88 ntBASIC9.51□□□□□ -0.89
SLC1A1P43005 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
SLC1A1P43005 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC9.51□□□□□ -0.89
SLC1A1P43005 SSBP2-205ENST00000505980 1521 ntTSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC9.51□□□□□ -0.89
SLC1A1P43005 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
SLC1A1P43005 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
SLC1A1P43005 NPIPB10P-201ENST00000424293 1354 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 SOCS5P2-201ENST00000449637 1359 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 LINC01550-202ENST00000502187 2455 ntTSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 VTRNA1-2-201ENST00000365241 89 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SLC1A1P43005 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC9.5□□□□□ -0.89
SLC1A1P43005 MRPS18BP1-201ENST00000414228 192 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC9.5□□□□□ -0.89
SLC1A1P43005 PRDX3P1-201ENST00000418695 763 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AC004448.4-209ENST00000421796 684 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC9.5□□□□□ -0.89
SLC1A1P43005 OR52J2P-201ENST00000427973 939 ntBASIC9.5□□□□□ -0.89
SLC1A1P43005 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms