Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 ZNF2-205ENST00000622059 1624 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 Z95114.3-201ENST00000624395 1921 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 OR10H4-201ENST00000322107 951 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 HSD17B7-202ENST00000367913 666 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 PADI4-202ENST00000375453 841 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 OSTCP6-201ENST00000407493 457 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 RNA5SP158-201ENST00000410298 102 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC021028.1-201ENST00000417559 598 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL035411.1-201ENST00000427762 690 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL772155.1-201ENST00000431077 347 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC068279.1-201ENST00000444323 888 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL359979.1-201ENST00000446145 487 ntTSL 3 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 LINC02248-202ENST00000451579 606 ntTSL 3 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 RN7SL865P-201ENST00000466711 289 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 SEM1-210ENST00000488005 775 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC003029.1-201ENST00000493495 603 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 HMGB3P14-201ENST00000494195 599 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL162431.3-201ENST00000503142 537 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC105416.1-201ENST00000506991 842 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC094104.2-201ENST00000509718 622 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC021860.1-201ENST00000515436 376 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC022679.1-201ENST00000522559 496 ntTSL 2 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 ENPP7P8-203ENST00000529093 317 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC079363.1-201ENST00000551366 1125 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 OTX2-206ENST00000555006 1279 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AKR1B10P2-201ENST00000577332 927 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 CDRT15P1-201ENST00000577632 564 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 MIR6785-201ENST00000618984 81 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL121955.1-201ENST00000620852 303 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC073255.1-201ENST00000624149 177 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AP000962.2-201ENST00000624971 1101 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 AC244452.4-201ENST00000637112 283 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.43□□□□□ -1.06
SNX18Q96RF0 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 DNAAF4-204ENST00000457155 1567 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.43□□□□□ -1.06
SNX18Q96RF0 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNX18Q96RF0 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 RSPRY1-201ENST00000394420 3547 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 RNA5SP298-201ENST00000364991 111 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 KRTAP13-3-201ENST00000390690 704 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 GAPDHP72-201ENST00000402643 1010 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 SOX9-AS1-201ENST00000412640 635 ntTSL 3 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 AL353779.2-201ENST00000424917 308 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 FERP1-201ENST00000436391 793 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 KRTAP19-10P-201ENST00000445258 187 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 RPSAP36-201ENST00000465940 869 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC106820.1-201ENST00000468708 420 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC126182.2-201ENST00000496098 339 ntBASIC8.42□□□□□ -1.06
SNX18Q96RF0 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC8.42□□□□□ -1.06
SNX18Q96RF0 TMEM92-202ENST00000507382 573 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNX18Q96RF0 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms