Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC9.57□□□□□ -0.88
SLC1A1P43005 HNRNPA1P64-201ENST00000411674 922 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 AL135905.1-201ENST00000416120 801 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 LINC02262-201ENST00000416680 735 ntTSL 3 BASIC9.57□□□□□ -0.88
SLC1A1P43005 TIMM8AP1-201ENST00000419283 295 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AC012501.1-203ENST00000424322 586 ntTSL 4 BASIC9.57□□□□□ -0.88
SLC1A1P43005 MTND4P30-201ENST00000450281 899 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 RPL12P37-201ENST00000486874 495 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 OR10J8P-201ENST00000504659 929 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 ANKRD46-203ENST00000519316 713 ntTSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 BEST3-210ENST00000551160 721 ntTSL 3 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AC079363.1-201ENST00000551366 1125 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AC005476.2-202ENST00000554634 464 ntTSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 HMGN1P31-201ENST00000590085 304 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 Z98884.2-201ENST00000602406 393 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 AC099343.2-201ENST00000605082 686 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 AC244255.1-201ENST00000613463 398 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 MIR6744-201ENST00000619480 66 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 ACTR3BP2-201ENST00000413404 1373 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
SLC1A1P43005 MALAT1-202ENST00000534336 8708 ntBASIC9.57□□□□□ -0.88
SLC1A1P43005 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.57□□□□□ -0.88
SLC1A1P43005 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
SLC1A1P43005 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SLC1A1P43005 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
SLC1A1P43005 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SLC1A1P43005 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 NCAPD2P1-201ENST00000432906 1801 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 AC011297.1-201ENST00000620503 2110 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 ANKRD20A21P-202ENST00000623715 3588 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
SLC1A1P43005 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC9.56□□□□□ -0.88
SLC1A1P43005 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC9.56□□□□□ -0.88
SLC1A1P43005 MRPS33-204ENST00000469351 744 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AC092965.1-201ENST00000469748 490 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 RN7SL78P-201ENST00000495193 281 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 FGF12-AS1-202ENST00000530635 555 ntTSL 4 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AP001005.2-201ENST00000575066 763 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AC008569.2-201ENST00000589702 889 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 MIR6777-201ENST00000613934 66 ntBASIC9.56□□□□□ -0.88
SLC1A1P43005 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 LINC00506-204ENST00000630120 587 ntTSL 4 BASIC9.56□□□□□ -0.88
SLC1A1P43005 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SLC1A1P43005 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC9.56□□□□□ -0.88
SLC1A1P43005 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC9.56□□□□□ -0.88
SLC1A1P43005 AC026765.2-201ENST00000551875 1330 ntTSL 2 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms