Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 C10orf126-201ENST00000375520 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PPP1R10P1-201ENST00000531876 1795 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 LINC00488-201ENST00000494582 2520 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 FAM213AP1-201ENST00000418757 668 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 Z73361.1-201ENST00000423690 612 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 PDCL3P6-201ENST00000429744 706 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CHCHD4P2-201ENST00000431135 420 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 GRPEL2P3-201ENST00000448626 640 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 COX5BP6-201ENST00000454311 211 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC048341.1-201ENST00000480482 403 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC112173.1-201ENST00000505876 327 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC146949.1-201ENST00000505946 423 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC146944.1-201ENST00000508439 418 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 RPPH1-3P-201ENST00000516541 322 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 SDHD-203ENST00000526592 861 ntTSL 3 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 OR7E5P-201ENST00000529916 706 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 TMED10P1-201ENST00000534816 655 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 RNASE1-205ENST00000555698 655 ntTSL 3 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 OR7E105P-201ENST00000555893 993 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC079789.1-201ENST00000561655 885 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 NDUFA3P6-201ENST00000571486 250 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC024267.6-202ENST00000579187 1103 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 DYNLL1P3-201ENST00000596113 266 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC145285.8-201ENST00000619561 255 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AC025279.3-201ENST00000622398 104 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AP003400.4-201ENST00000623832 399 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AL360294.1-201ENST00000640945 2438 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AL008638.6-201ENST00000623947 4254 ntBASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 FCRL1-203ENST00000368176 2596 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
NPIPA3F8WFD2 UTS2-203ENST00000377516 1601 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 TBX22-202ENST00000373296 2355 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC8.43□□□□□ -1.06
NPIPA3F8WFD2 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms