Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KF456110.1-201ENST00000641105 385 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC116456.2-201ENST00000623018 2209 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 UVRAG-208ENST00000532130 1831 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC100756.3-201ENST00000618455 1816 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC011330.1-201ENST00000510070 3235 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 KCNIP1-209ENST00000616807 1448 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PPP1R10P1-201ENST00000531876 1795 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SPACA5B-201ENST00000304270 595 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SPACA5-202ENST00000376940 571 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 DCTN3-204ENST00000378913 951 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 RPL35P3-201ENST00000403133 371 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AL691447.1-201ENST00000419456 387 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AL354892.1-201ENST00000430250 335 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AL162584.1-201ENST00000437097 633 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC068051.1-202ENST00000437883 543 ntTSL 4 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 VDAC1P4-201ENST00000450197 835 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 RN7SL400P-201ENST00000473634 296 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 MED27-204ENST00000474263 762 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 SF3B1-211ENST00000487698 2127 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 RN7SL584P-201ENST00000492309 297 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 GAPDHP70-201ENST00000515281 1045 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 OR7E11P-201ENST00000532901 952 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 LRRC37A13P-201ENST00000546055 287 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AL390254.1-201ENST00000554033 465 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC004858.1-201ENST00000554078 242 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 RNASE12-201ENST00000556526 631 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC103809.1-201ENST00000585167 651 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AFMID-214ENST00000591952 582 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC063977.1-201ENST00000600623 371 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC113349.2-201ENST00000607804 377 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 PSG3-206ENST00000614582 1287 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC145285.8-201ENST00000619561 255 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC025279.3-201ENST00000622398 104 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC098476.1-201ENST00000623173 1025 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 FO538757.2-201ENST00000624431 570 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 AK2-214ENST00000626911 160 ntTSL 3 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 AC124045.1-201ENST00000606008 1953 ntBASIC8.49□□□□□ -1.05
SNX18Q96RF0 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 TRIM43B-202ENST00000639673 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNX18Q96RF0 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 PRMT3-203ENST00000437750 1736 ntTSL 2 BASIC8.49□□□□□ -1.05
SNX18Q96RF0 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CCDC65-202ENST00000320516 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 FAM71C-201ENST00000324341 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC026356.2-201ENST00000614539 1796 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 ZMAT2-201ENST00000274712 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 AC063923.1-201ENST00000478982 1619 ntBASIC8.48□□□□□ -1.05
SNX18Q96RF0 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.48□□□□□ -1.05
SNX18Q96RF0 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SIRPG-201ENST00000216927 831 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNX18Q96RF0 SPINT3-201ENST00000217428 476 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms