Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC103855.2-202ENST00000527642 568 ntTSL 4 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AL139353.2-201ENST00000549844 699 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 OAS1-211ENST00000553185 664 ntTSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 ADSSL1-210ENST00000556623 652 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC9.63□□□□□ -0.87
SLC1A1P43005 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 RPS20-212ENST00000618656 627 ntTSL 3 BASIC9.63□□□□□ -0.87
SLC1A1P43005 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 AC103764.1-201ENST00000505083 2096 ntTSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 ZNF45-201ENST00000269973 3898 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SLC1A1P43005 NNT-208ENST00000512996 4288 ntTSL 5 BASIC9.63□□□□□ -0.87
SLC1A1P43005 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC9.63□□□□□ -0.87
SLC1A1P43005 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 CSMD2-AS1-202ENST00000425631 1367 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SLC1A1P43005 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 AC016722.3-201ENST00000568862 2463 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 MAPK10-316ENST00000641430 2285 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 TTTY11-201ENST00000253470 837 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 OR3A3-201ENST00000291231 966 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 SHC3-201ENST00000375831 569 ntTSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 IGLC2-201ENST00000390323 462 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SLC1A1P43005 IGLC3-201ENST00000390325 462 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SLC1A1P43005 LINC01090-201ENST00000415357 881 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 SNRPCP19-201ENST00000420809 460 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 IFNWP18-201ENST00000437472 591 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 PFN1P1-201ENST00000442087 423 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AP001885.1-202ENST00000444002 1255 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 IFNWP9-201ENST00000448683 591 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC9.62□□□□□ -0.87
SLC1A1P43005 RN7SL242P-201ENST00000491451 297 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 RPL29P22-201ENST00000498718 459 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AK4P2-201ENST00000504372 670 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AC105416.1-201ENST00000506991 842 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AC097518.1-201ENST00000512516 421 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 AC027544.1-201ENST00000538408 433 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 LINC01852-202ENST00000559232 533 ntTSL 4 BASIC9.62□□□□□ -0.87
SLC1A1P43005 KRT18P47-201ENST00000561341 977 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SLC1A1P43005 MIR3911-201ENST00000577791 109 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC9.62□□□□□ -0.87
SLC1A1P43005 PPP3CB-AS1-211ENST00000600887 489 ntTSL 5 BASIC9.62□□□□□ -0.87
SLC1A1P43005 MZT1P1-201ENST00000603781 246 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC9.62□□□□□ -0.87
SLC1A1P43005 MIR6511B2-201ENST00000636908 71 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC9.62□□□□□ -0.87
SLC1A1P43005 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 LINC02533-201ENST00000563079 2272 ntTSL 4 BASIC9.62□□□□□ -0.87
SLC1A1P43005 AL662907.3-201ENST00000641271 1932 ntBASIC9.62□□□□□ -0.87
SLC1A1P43005 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
SLC1A1P43005 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SLC1A1P43005 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC9.62□□□□□ -0.87
SLC1A1P43005 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC9.61□□□□□ -0.87
SLC1A1P43005 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 GUCY1B3-203ENST00000503520 1951 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC9.61□□□□□ -0.87
SLC1A1P43005 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SLC1A1P43005 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 NXNP1-201ENST00000397383 1051 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 RPL5P31-201ENST00000399168 635 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 UBTFL7-201ENST00000418789 1191 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AL161447.1-201ENST00000427811 230 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SLC1A1P43005 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
SLC1A1P43005 AL133368.1-201ENST00000486273 814 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC233724.2-201ENST00000515727 271 ntBASIC9.61□□□□□ -0.87
SLC1A1P43005 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC9.61□□□□□ -0.87
SLC1A1P43005 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms