Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1G3Q9Y6M4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1G3Q9Y6M4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1G3Q9Y6M4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1G3Q9Y6M4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 UNC93B4-201ENST00000505679 747 ntBASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1G3Q9Y6M4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CSNK1G3Q9Y6M4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1G3Q9Y6M4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 AC092368.3-202ENST00000574180 1591 ntBASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 AC105020.6-201ENST00000621523 1217 ntBASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CSNK1G3Q9Y6M4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1G3Q9Y6M4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 KRT17P3-201ENST00000420566 1262 ntBASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms