Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHB13Q9Y5F0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHB13Q9Y5F0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDHB13Q9Y5F0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 AC007322.1-201ENST00000426983 750 ntBASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 AC092666.2-201ENST00000613287 246 ntBASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHB13Q9Y5F0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHB13Q9Y5F0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 AC068338.2-201ENST00000563278 1430 ntBASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 FAM21FP-204ENST00000608637 956 ntBASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHB13Q9Y5F0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 AC027702.1-201ENST00000563810 1770 ntBASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHB13Q9Y5F0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB13Q9Y5F0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHB13Q9Y5F0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB13Q9Y5F0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHB13Q9Y5F0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 AC073111.5-205ENST00000641717 521 ntBASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHB13Q9Y5F0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB13Q9Y5F0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHB13Q9Y5F0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PCDHB13Q9Y5F0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms