Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 AC244015.2-201ENST00000616358 1861 ntBASIC21.57■■□□□ 1.04
YIPF1Q9Y548 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
YIPF1Q9Y548 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 PGM5P4-201ENST00000421970 445 ntBASIC21.56■■□□□ 1.04
YIPF1Q9Y548 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
YIPF1Q9Y548 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
YIPF1Q9Y548 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 AP006294.2-201ENST00000641667 209 ntBASIC21.54■■□□□ 1.04
YIPF1Q9Y548 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
YIPF1Q9Y548 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 AL356652.1-201ENST00000615962 565 ntBASIC21.53■■□□□ 1.04
YIPF1Q9Y548 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
YIPF1Q9Y548 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 AC233263.1-201ENST00000578059 224 ntBASIC21.52■■□□□ 1.04
YIPF1Q9Y548 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms