Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
TCAF1Q9Y4C2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 AC073130.3-201ENST00000624389 2278 ntBASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 AC026271.2-201ENST00000428091 497 ntBASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
TCAF1Q9Y4C2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TCAF1Q9Y4C2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TCAF1Q9Y4C2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TCAF1Q9Y4C2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.64■□□□□ 0.9
TCAF1Q9Y4C2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TCAF1Q9Y4C2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 AL121603.2-201ENST00000557373 2117 ntBASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCAF1Q9Y4C2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 RARRES2P6-201ENST00000567333 442 ntBASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCAF1Q9Y4C2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 AC007322.3-201ENST00000426526 701 ntBASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 KRT18P5-201ENST00000436075 1291 ntBASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCAF1Q9Y4C2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms