Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 IGHV3-19-201ENST00000521488 291 ntBASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 AC092720.2-201ENST00000602388 1665 ntBASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
UBE2D4Q9Y2X8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 AC126544.1-201ENST00000580842 1059 ntBASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 AC233992.3-201ENST00000607491 485 ntBASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBE2D4Q9Y2X8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 AP004607.4-201ENST00000530158 1459 ntBASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBE2D4Q9Y2X8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 MIR4767-201ENST00000582827 78 ntBASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 TCF3P1-201ENST00000423021 1937 ntBASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBE2D4Q9Y2X8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBE2D4Q9Y2X8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms