Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
NINLQ9Y2I6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
NINLQ9Y2I6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC28.26■■■□□ 2.12
NINLQ9Y2I6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
NINLQ9Y2I6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.26■■■□□ 2.12
NINLQ9Y2I6 PNMA6B-201ENST00000538162 1200 ntBASIC28.26■■■□□ 2.12
NINLQ9Y2I6 AC011484.1-201ENST00000377652 1995 ntBASIC28.26■■■□□ 2.11
NINLQ9Y2I6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
NINLQ9Y2I6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC28.26■■■□□ 2.11
NINLQ9Y2I6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
NINLQ9Y2I6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NINLQ9Y2I6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 MIR1224-201ENST00000408193 85 ntBASIC28.24■■■□□ 2.11
NINLQ9Y2I6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 AL356652.1-201ENST00000615962 565 ntBASIC28.24■■■□□ 2.11
NINLQ9Y2I6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC28.24■■■□□ 2.11
NINLQ9Y2I6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 AC008403.3-201ENST00000598924 454 ntBASIC28.23■■■□□ 2.11
NINLQ9Y2I6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NINLQ9Y2I6 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 C2orf69P4-201ENST00000565394 541 ntBASIC28.22■■■□□ 2.11
NINLQ9Y2I6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NINLQ9Y2I6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 GCSHP5-201ENST00000443090 522 ntBASIC28.21■■■□□ 2.11
NINLQ9Y2I6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.21■■■□□ 2.11
NINLQ9Y2I6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NINLQ9Y2I6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
NINLQ9Y2I6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NINLQ9Y2I6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC28.2■■■□□ 2.11
NINLQ9Y2I6 AC092368.3-202ENST00000574180 1591 ntBASIC28.2■■■□□ 2.11
NINLQ9Y2I6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC28.2■■■□□ 2.11
NINLQ9Y2I6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.2■■■□□ 2.1
NINLQ9Y2I6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.2■■■□□ 2.1
NINLQ9Y2I6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NINLQ9Y2I6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NINLQ9Y2I6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms