Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA6Q9UN73 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
PCDHA6Q9UN73 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA6Q9UN73 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
PCDHA6Q9UN73 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA6Q9UN73 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 MIPEPP3-201ENST00000412105 444 ntBASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 AC006128.1-201ENST00000624704 1661 ntBASIC23.57■■□□□ 1.36
PCDHA6Q9UN73 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
PCDHA6Q9UN73 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA6Q9UN73 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA6Q9UN73 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 BX276092.2-201ENST00000417668 665 ntBASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 AL355472.2-201ENST00000422958 438 ntBASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 AC098934.4-201ENST00000564127 592 ntBASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 AC100791.3-201ENST00000617619 330 ntBASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHA6Q9UN73 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 AC027702.1-201ENST00000563810 1770 ntBASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA6Q9UN73 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms