Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRNA9Q9UGM1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 RBM17P2-201ENST00000616397 1405 ntBASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 AC006015.1-201ENST00000429970 570 ntBASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRNA9Q9UGM1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 AC121338.2-201ENST00000622535 1744 ntBASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 AC022517.1-201ENST00000592429 346 ntBASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CHRNA9Q9UGM1 AP005212.1-201ENST00000581547 1997 ntBASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 AC010536.3-201ENST00000620306 533 ntBASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHRNA9Q9UGM1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 GABARAPL3-202ENST00000624044 1851 ntBASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.72■□□□□ 0.59
CHRNA9Q9UGM1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 AC092667.1-201ENST00000434301 2586 ntBASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 MFSD11-216ENST00000590393 1141 ntBASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms