Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPSF2Q9P2I0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPSF2Q9P2I0 AC005224.4-201ENST00000583262 1652 ntBASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 EDA-201ENST00000338901 1233 ntBASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 AC121338.2-201ENST00000622535 1744 ntBASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPSF2Q9P2I0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 AF213884.3-201ENST00000563833 479 ntBASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 AC110285.6-201ENST00000617652 491 ntBASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CPSF2Q9P2I0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 AP005212.1-201ENST00000581547 1997 ntBASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms