Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COMMD9Q9P000 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.47■□□□□ 0.39
COMMD9Q9P000 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 SMG8-203ENST00000578922 2178 ntBASIC17.47■□□□□ 0.39
COMMD9Q9P000 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COMMD9Q9P000 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COMMD9Q9P000 AC018445.3-201ENST00000624177 1945 ntBASIC17.47■□□□□ 0.39
COMMD9Q9P000 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD9Q9P000 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD9Q9P000 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 AC087239.1-201ENST00000622671 572 ntBASIC17.46■□□□□ 0.39
COMMD9Q9P000 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD9Q9P000 OR7E47P-201ENST00000546390 1422 ntBASIC17.46■□□□□ 0.39
COMMD9Q9P000 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
COMMD9Q9P000 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 AC006455.2-201ENST00000429931 906 ntBASIC17.45■□□□□ 0.38
COMMD9Q9P000 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 AL356740.2-201ENST00000601559 647 ntBASIC17.45■□□□□ 0.38
COMMD9Q9P000 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COMMD9Q9P000 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD9Q9P000 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
COMMD9Q9P000 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 BX323043.1-201ENST00000641006 1765 ntBASIC17.44■□□□□ 0.38
COMMD9Q9P000 OR2I1P-207ENST00000453522 948 ntBASIC17.44■□□□□ 0.38
COMMD9Q9P000 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD9Q9P000 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD9Q9P000 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
COMMD9Q9P000 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COMMD9Q9P000 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD9Q9P000 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.43■□□□□ 0.38
COMMD9Q9P000 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
COMMD9Q9P000 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.43■□□□□ 0.38
COMMD9Q9P000 AC099791.2-201ENST00000605725 427 ntBASIC17.43■□□□□ 0.38
COMMD9Q9P000 AC092171.4-201ENST00000609130 632 ntBASIC17.43■□□□□ 0.38
COMMD9Q9P000 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COMMD9Q9P000 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms