Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 MIR3181-201ENST00000578512 73 ntBASIC19.86■□□□□ 0.77
NDE1Q9NXR1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 FP700111.2-201ENST00000619190 1892 ntBASIC19.86■□□□□ 0.77
NDE1Q9NXR1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDE1Q9NXR1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 AC099791.2-201ENST00000605725 427 ntBASIC19.85■□□□□ 0.77
NDE1Q9NXR1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
NDE1Q9NXR1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 MIR6724-1-201ENST00000616420 92 ntBASIC19.84■□□□□ 0.77
NDE1Q9NXR1 MIR6724-2-201ENST00000616483 92 ntBASIC19.84■□□□□ 0.77
NDE1Q9NXR1 MIR6724-4-201ENST00000617390 92 ntBASIC19.84■□□□□ 0.77
NDE1Q9NXR1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 MIR6724-3-201ENST00000622482 92 ntBASIC19.84■□□□□ 0.77
NDE1Q9NXR1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDE1Q9NXR1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 AL033527.3-201ENST00000566366 1196 ntBASIC19.83■□□□□ 0.77
NDE1Q9NXR1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDE1Q9NXR1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NDE1Q9NXR1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 AC092171.4-201ENST00000609130 632 ntBASIC19.82■□□□□ 0.76
NDE1Q9NXR1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NDE1Q9NXR1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms